BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033G01LP1|AL429787
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1658 1604 0.0
>3x_Contig1658
Length = 13395
Score = 1604 bits (803), Expect = 0.0
Identities = 853/870 (98%), Gaps = 6/870 (0%)
Strand = Plus / Plus
Query: 1 aattgtaggaaactagtacaggaatcgatggagaccctgcttaatgatatgccatgaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 aattgtaggaaactagtacaggaatcgatggagaccctgcttaatgatatgccatgaaga 1319
Query: 61 actattacacatacaaggccatcagggacactcaatcgctactaatcattgcaagaagta 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1320 actattacacatacaaggccatcagggacact-aatcgctactaatcattgcaagaagta 1378
Query: 121 tgtctgtaatgataatcactgtgaacgatattcattctgttatattgaagacgcttcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1379 tgtctgtaatgataatcactgtgaacgatattcattctgttatattgaagacg-ttcaaa 1437
Query: 181 tctgtaaacaatgtatatactggatacataaacaaacataagcactgaaagttaaacgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1438 tctgtaaacaatgtatatactggatacataaacaaacataagcactgaaagttaaacgaa 1497
Query: 241 ccacaacttatcgtgaatcggttgggatcaggtgaagcgagccataacagttttatttgc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1498 ccacaacttatcgtgaatcggttgggatcaggtgaagcgagccataacagttttatttgg 1557
Query: 301 gcagctgctgatgggcttagaatatagtatttyytttcatctcggatactagagaccaga 360
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1558 --agctgctgatgggcttagaatatagtattttttttcatctcggatactagagaccaga 1615
Query: 361 agacagcgactcaagacacacaagggaatggaaactcagggctctgagagtccccgcggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1616 agacagcgactcaagacacacaagggaatggaaactcagggctctgagagtccccgcggc 1675
Query: 421 gacatatcttcttcgaggagggtattaaagatgcaaacgattccaacggagacaccggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1676 gacatatcttcttcgaggagggtattaaagatgcaaacgattccaacggagacaccggaa 1735
Query: 481 aggaaaagmtcyacacagcagagtttcgaaacagatgacgagtttcagttcagcgcggca 540
|||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1736 aggaaaagatctacacagcagagtttcgaaacagatgacgagtttcagttcag-gcggca 1794
Query: 541 tcagtgcaaagaagtcacgatttggagacaggttacmagamttccagagcgttaaggatg 600
| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1795 t-agtgcaaagaagtcacgatttggagacaggttacaagaattccagagcgttaaggatg 1853
Query: 601 cmagamgggtcgammatttcaattcgtcgtttcaagtacctccgcaatcacaagaagagc 660
| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1854 caagaagggtcgaaaatttcaattcgtcgtttcaagtacctccgcaatcacaagaagagc 1913
Query: 661 atcagcagtatacgggacaagcattcccgccccagtacccggcaccaactcagttgccgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1914 atcagcagtatacgggacaagcattcccgccccagtacccggcaccaactcagttgccgt 1973
Query: 721 ctcctcaaaggatgatcccaatgccaatggtgtattattatgcggctgcaaaccagcagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1974 ctcctcaaaggatgatcccaatgccaatggtgtattattatgcggctgcaaaccagcagc 2033
Query: 781 ccggtgctgtaccggcaggcacacaaccacagcaatatgccataccacagcaagggatgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2034 ccggtgctgtaccggcaggcacacaaccacagcaatatgccataccacagcaagggatgg 2093
Query: 841 ggataaattttcaagcaatgaaccaattca 870
||||||||||||||||||||||||||||||
Sbjct: 2094 ggataaattttcaagcaatgaaccaattca 2123
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4461
Number of Sequences: 1807
Number of extensions: 4461
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)